CBC Workshop 7. - 14. June 2007
A new Norwegian Center of Excellence, called "Center for Biomedical Computing", is in the process of starting up at the Simula Research Laboratory in Oslo. The Center will organize a workshop on modeling and computation of biomedical processes in the period June 7-14 with the purpose of bringing together collaborators of the center and international scientists working with topics of relevance for the center.
Invited Speakers
Invited speakers include:
- Mr. Christer Ahlström - Linköping University
- Dr. Øyvind Andreassen - Norwegian Defence Research Establishment (FFI)
- Prof. Per Ask - Linköping University
- Prof. Scott Baden -
University of California, San Diego
- Prof. Torill Berg - University of Oslo
- Dr. Bindi Brook - University of Nottingham
- Dr. Simone Deparis - École Polytechnique Fédérale De Lausanne
- Mr. Novak Elliott - University of Warwick
- Prof. William K. George - Chalmers University of Technology, Gothenburg
- Dr. Nils-Erik Hörlin - KTH, Stockholm
- Prof. Tor Ingebrigtsen - (Regional Health Authorities of North Norway and University of Tromsø)
- Mr. Trygve K. Karper - University of Oslo
- Prof. Robert C. Kirby - Texas Tech University
- Dr. Matthew Knepley - Argonne National Laboratory
- Senior Scientist Trond Kvamsdal - SINTEF, Norway
- Prof. Mats G. Larson - Umeå University
- Prof. Andrew McCulloch - University of California, San Diego
- Dr. Mikael Mortensen - Norwegian Defence Research Establishment (FFI)
- Dr. Hari Radhakrishnan - University of Cyprus, Nicosia
- Dr. Anders Pettersson Reif - Norwegian Defence Research Establishment (FFI)
- Dr. Tiina Roose - Oxford University
- Prof. Robert Schroter - Imperial College, London
- Dr. Jennifer Siggers - Imperial College, London
- Prof. Bjørn Skallerud - Norwegian University of Science and Technology (NTNU), Trondheim
- Mr. Murat
Tutkun - Chalmers/FFI
- Dr. Carl Erik Wasberg - Norwegian Defence Research Establishment (FFI)
- Dr. Sarah Waters - University of Nottingham
- Dr. Robert J. Whittaker - University of Nottingham
Program
Thursday, June 7 - Building, Installing and Distributing Scientific Software
Place: "Alburommet" at Simula
12.00-12.45 Ilmar Wilbers (Simula) and Arve Knudsen (Simula):
Various Techniques for Distributing Software Consisting of Python,
Fortran, C and C++
12.45-13.00 Coffee
13.00-13.45 Åsmund Ødegård (Simula): Challenges with Distributing
the PyCC Environment
13.45-14.30 Matthew Knepley (Argonne National Laboratory):
Experiences with the Build System for PETSc
14.45 Discussion
Friday, June 8 - Numerical Methods for Fluid Flow
Place: "Storstua" at Simula
10.30-11.15 Mats G. Larson (Umeå Univ.): Multiscale Modeling of
Turbulent Flow
11.15-12.00 Mats G. Larson (Umeå Univ.): Adaptivity and Error
Estimation for Multiphysics Problems
12.00-13.15 Lunch
13.15-14.00 Trygve Karper (Univ. of Oslo): Unified Finite Element
Discretizations of Coupled Darcy-Stokes Flow
14.00-14.45 Emil Løvgren (Simula): Reduced Basis Modeling of Complex
Flow Systems
14.45-15.00 Coffee
15.00-15.45 Robert Kirby (Texas Tech): From Functional Analysis to Preconditioning: Connecting Hilbert space to Matrix methods - abstract
Dinner
Monday, June 11 - Modeling and Simulation of Biomedical Processes
Place: "Storstua" at Simula
9.00-9.15 Hans Petter Langtangen (Simula, Univ. of Oslo): Welcome
& introduction
9.15-10.00 Torill Berg (Univ. of Oslo): Basic Cardiovascular
Physiology for Dummies
10.00-10.15 Coffee
10.15-11.00 Andrew McCulloch (Univ. of California, San Diego):
Multi-scale Modeling of Cardiac Electromechanical
Interactions
11.00-11.45 Bjørn Skallerud (NTNU): Modeling of the Mitral Valve in
the Heart
11.45-13.00 Lunch
13.15-14.00 Malin Siklosi (Simula): Multiscale Modeling of the
Acoustic Properties of Lung Parenchyma
14.00-14.45 Robert Schroter (Imperial College): How Do We Model Lung
Tissue Behavior?
14.45-15.00 Coffee
15.00-15.30 Tor Ingebrigtsen (Regional Health Authorities of North
Norway, Univ. of Tromsø): Medical Aspects of The Circle of
Willis
15.30-16.15 Per Ask (Linköping Univ.): Some Experience from
Cardiovascular Engineering at Linköping University
19.00: Dinner at Ekebergrestauranten
Tuesday, June 12 - Modeling and Simulation of Biomedical Processes
Place: "Storstua" at Simula
9.00-9.45 Anders Logg (Simula) and Ola Skavhaug (Simula):
Software Tools for Partial Differential Equations
9.45-10.00 Coffee
10.00-10.45 Trond Kvamsdal (SINTEF) and Kent-Andre Mardal (Simula):
Computation of Hemodynamics in the Circle of Willis
10.45-11.30 Glenn Terje Lines (Simula): Cardiac Computing at
Simula
11.30-13.00 Lunch
13.00-13.45 Sarah Waters (Univ. of Nottingham): Flow and Nutrient
Transport in Rotating Bioreactors
13.45-14.30 Nils-Erik Hörlin (KTH, Stockholm): Vibro-acoustic
Modeling of Porous Elastic Materials
14.30-14.45 Coffe
14.45-15.30 Bindi Brook (Univ. of Nottingham): An Integrative
Modeling Approach for Targeting Drug Delivery to the Lungs
15.30-16.00 Novak Elliott (Univ. of Warwick): Coughing Up a Storm:
Syringomyelia and Wave Propagation In The Spinal Cord
16.10-20.00 Trip around
the Oslo fjord by boat (food included)
Wednesday, June 13 - Modeling and Simulation of Biomedical
Processes
Place: "Storstua" at Simula
9.00-9.45 Jennifer Siggers (Imperial College): A Mathematical
Model of Blood Flow in Curved Arteries
9.45-10.00 Coffee
10.00-10.45 Robert Whittaker (Univ. of Nottingham):
Fluid-Structure Interaction in Collapsible Tubes
10.45-11.30 Simone Deparis (École Polytechnique Fédérale De Lausanne):
LifeV: Application of a Finite Element Library to Hemodynamics
Problems
11.30-13.00 Lunch
13.00-13.45 Tiina Roose (Oxford Univ.): On Multi-scale Modeling
of Biological Branching Structures
13.45-14.30 Christer Ahlstrøm (Linköping Univ.): Processing of Heart
Sound Signals
14.30-14.45 Coffee
14.45-15.30 Scott Baden (Univ. of California, San Diego):
Overcoming Obstacles with Graph Based Programming Models - abstract
15.30-16.15 Scott Baden (Univ. of California, San Diego): A Data
Centric View of Scientific Computing - abstract
Dinner
Thursday, June 14 -Workshop on turbulence & aerosol
modeling
Place: "Storstua" at Simula
9.00-9.45 Øyvind Andreassen (FFI): Visualization of Complex Flow Fields
9.45-10.00 Coffee
10.00-10.45 B. Anders Pettersson Reif (FFI): Single-Point
Turbulence Modeling – Current Status and Challenges Ahead
10.45-11.30 William K. George (Chalmers): Some Experimental
Challenges of Turbulence Studies Related to Dispersion
11.30-13.00 Lunch
13.00-13.45 Hari Radhakrishnan (University of Cyprus): Modeling
Turbulent Particle Transport in Human Airways
13.45-14.30 Mikael Mortensen (FFI): Modeling Turbulent Sprays
Including Chemical Reactions
14.30-15.00 Coffee
15.00-15.45 Carl Erik Wasberg (FFI): Application of a Spectral
Element Method in Turbulence Simulation
15.45 - 16.30 Murat Tutkun (Chalmers/FFI) Markovian Properties
of Passive Scalars in Turbulent Flows"
===========================
- Practical information -
How to get to Simula:
From the airport OSL Gardermoen:
The most convenient way to go from the airport OSL Gardermoen to
Simula is to use the Airport express
train. The closest train stop is Lysaker, and there is a train
departing from Gardermoen to Lysaker every 20 minutes. The train ride
from Gardermoen to Lysaker takes 35 minutes and costs NOK 160 (approx.
20 EUR) and you can buy your ticket at the train station.
From Lysaker train station, switch to bus 31 towards "Snarøya"
or "Fornebu". The bus stop is on your right hand side at the station
exit. You can buy a ticket on the bus. There is a bus departing from
Lysaker at least every 10 minutes. Take the bus to "IT Fornebu" bus
station (approximately 6 minutes). From the bus stop at "IT
Fornebu", you will be able to see the "IT Fornebu" building. The
entrance is on the other side (the sea side) of the grey and blue
colored terminal building. You will find Simula on the fourth floor.
(You may use either the entrance at Martin Linges vei 25 or
17).
From the city center:
To go from Oslo City center to Simula, take bus 31 towards "Snarøya"
or "Fornebu".
Bus 31 stops at several places in central Oslo; "Kirkeristen", "Kongens
gate" and "Nationaltheateret". Take the bus to "IT Fornebu" bus station
(approximately 30 minutes, the ticket you buy from the bus driver
should cost 33,- NOK). From the bus stop at "IT Fornebu", you
will be able to see the "IT Fornebu" building. The entrance is
on the other side (the sea side) of the grey and blue colored terminal
building. You will find Simula on the fourth floor. (You may use either
the entrance at Martin Linges vei 25 or 17).
General information about all public transport in and around Oslo can be found at Trafikanten.
Our visiting adress:A more detailed description together with a map can be found at:
Center for Biomedical Computing
Simula Research Laboratory
Martin Linges vei 17
1367 Snarøya
NORWAY
Phone: +47 67 82 82 00
email: post@simula.no
www.simula.no/about/contact/coordinates
===========================
- Social activities -
Monday 11/6 at 19:00 there will be a three course dinner at Ekebergrestauranten. A sign up list will be sent around before lunch on Monday, alternatively you can sign up for the dinner by sending an email to martinal@simula.no. Transport from Simula will be arranged for those who wish to stay here. For the rest of you, the address is Kongsveien 15, and you can take the trams 18 or 19 to the stop Sjømannsskolen (Ekebergbanen). The map below shows the path from the tram stop to the restaurant.

Tuesday 12/6 at 16:30-20:00 we will have a boat trip from Lysaker, traveling around the Oslo fjord while eating shrimps and enjoying sun and sea. A sign up list will be sent around before lunch on Monday, alternatively you can sign up for the boating trip by sending an email to martinal@simula.no. Transport from Simula will be arranged right after the last talk on Tuesday, and the boat leaves from Lysaker Brygge ( click here for angular view). Our destination will be Aker Brygge in Oslo.
For the days with no fixed program, a restaurant guide can be found at spisekartet.no. Several excellent restaurants are located at Aker Brygge close to the sea.
For those of you who arrive before or in the weekend, we recommend buying the Oslo Pass for 24 hours of free access to public transports and most museums. The pass can be bought at tourist information offices.
| What |
|
|---|---|
| When |
Jun 07, 2007 12:00 PM
to Jun 14, 2007 04:30 PM |
| Where | Simula |
| Contact Name | Tom Atkinson |
| Contact Phone | +47 93212854 |
| Add event to calendar |
|
