Biomedical Computing seminar series
The purpose of the seminar series is to create a forum for discussion of scientific topics related to the work in CBC. This is an open seminar and attendance of and contributions by other interested people are highly welcome.
The seminars give an opportunity for presenting surveys/introductions to fields of interest. They are also an opportunity for face-to-face discussions where everybody is invited to contribute!
The seminars will be organized on a volunteer basis every other Thursday at 12:00, where those who would like to present a topic will give a 30 minute talk, and then open up for questions and discussion.
A rough schedule of the planned talks is as follows:
| Date (dd.mm.yy) |
Topic | Link to reference material |
|---|---|---|
| 14.05.09 | Tiny Introduction to Jabref, by Andre Massing |
|
| 03.06.09 | Automation of Error Control with Application to FSI, by Anders Logg |
|
| 07.10.09 | An informal guide to continuum mechanics, by Harish Narayanan | |
| 14.10.09 | An informal guide to continuum mechanics, Part II by Harish Narayanan | |
| 28.10.09 | An informal guide to continuum mechanics, Part III by Harish Narayanan | |
| 28.01.10 | Introduction for the new year. Discussion about the new group name | |
| 04.02.10 |
Implementation of FEM assembling in DOLFIN, by Anders Logg |
|
| 11.02.10 | Automated Adaptivity - Current Status, by Marie R. Rognes |
|
| 18.02.10 | A posteriori error analysis of adaptive finite element methods for fluid-structure interaction, by Kristoffer Selim |
|
| 25.02.10 |
Convergence theory for adaptive finite elements, by Andre Massing |
|
| 05.03.10 |
Analysis and implementation of high-precision finite element methods for ordinary differential equations with application to the Lorenz system, by Benjamin Kehlet |
|
| 25.03.10 |
Meshbuilder brainstorming, by Benjamin Kehlet |
|
| 08.04.10 |
Meshing the human lung, by Aron Wahlberg |
|
| 22.04.10 |
What is cbc.twist, by Harish Narayanan |
|
| 03.06.10 |
A Note on the Efficiency and Accuracy of Some Common Finite Element Schemes for the Incompressible Navier-Stokes Equations, by Kristian Valen-Sendstad |
|
| 10.06.10 |
Short talks by Aron Wahlberg "Short introduction for the streamline-diffusion method for convection-diffusion equations", Tor Gillberg "The Mathematics of Reservoir Simulation" and Karen-Helene Støverud "Mixed Finite Element for the Stokes Equation" |
|
| 24.06.10 |
Revisiting Finite Element Matrix Assembly, by Didem Unat |
|
| 16.09.10 |
Computational simulations of the shaken baby syndrom - history and challenges, by Anna Blechingberg |
|
| 25.11.10 |
Nitsche's method on overlapping meshes in 3D, by Andre Massing |
|
| 12.01.11 |
Parallel computing in DOLFIN, by Anders Logg |
|
| 01.02.11 |
Block operator algebra with PyDOLFIN, by Joachim Berdal Haga |
|
| 24.02.11 |
Efficient implementation of Nitsche's method on overlapping meshes in 3D, by Andre Massing |
|
| 12.04.11 |
Computing the shear stress in biomedical flows, by Eline Sundt |
|
| 03.05.11 |
Fluid-Structure Interaction in Biological Flows, by Kristian Valen-Sendstad |
|
| 04.05.11 |
Adaptive Finite Element Methods for Fluid–Structure Interaction and Incompressible Flow, by Kristoffer Selim |
|
| 18.05.11 |
Multiscale problems and techniques, by Kristoffer Selim |
|
| 19.05.11 |
"The effect of varying cross-sectional areas on cerebrospinal fluid flow and pressure in the cervical spine", by Karen-Helene Støverud and "On the complexity of stationary flow in patient-specific aneurysm", by Kristian Valen-Sendstad |
|
| 22.09.11 |
On the integration of DUNE and FEniCS, by Steffen Müthing |
|
| 29.09.11 |
Solving Poisson's Equation with DOLFIN 0.2.11 (2002)
A study of the portability of scientific codes across the time domain by Anders Logg |
|
| 13.10.11 |
"More or less shocking?" or "Using energy estimates to answer scientific questions" or "Playing with eigenvalue solvers in DOLFIN" by Marie Rognes |
|
| 20.10.11 |
Using GPUs to solve linear systems in DOLFIN by Fredrik Valdmanis |
|
| 24.11.11 |
Error analysis of nonlinear dynamical systems/code generation for ODEs by Benjamin Kehlet |
|
| 01.12.11 |
The Computing in Science Education project by Hans Petter Langtangen |
|
| 12.01.12 |
On well-posedness and stability by Kent-Andre Mardal |
|
| 19.01.12 |
Magnetic Resonance Imaging (MRI) -The Basics by Karen-Helene Støverud |
|
| 02.02.12 |
News in C++11 by Martin Sandve Alnæs |
|
| 15.02.12 |
ESDIRK methods with FEniCS by Knut Erik Skare |
|
| 15.03.12 |
Understanding the performance of stencil-based computations on multicore CPUs by Xing Cai |
|
| 19.04.12 |
Triangular surface mesh improvement and tetrahedral mesh generation using GAMer and Blender by Johan Hake |
|
| 07.11.12 |
Bits and pieces by Martin Alnæs |
|
| 14.11.12 |
The C(ontinuous) I(nterior) P(enalty) method by Andre Massing |
|
| 21.11.12 |
Strongly coupled simulations of cardiac electro-mechanics by Joakim Sundnes |
|
| 13.12.12 |
Robust mesh generation by Benjamin Kehlet Effects of pulsatile CSF pressure on the spinal cord tissue by Karen-Helene Støverud |
|
| 19.12.12 |
Variational forms over arbitrary dimension tensor product finite element spaces by Marie Rognes | |
| 24.01.13 |
Hashdist -- an attempt to solve the problem of scientific software distribution by Dag Sverre Seljebotn |
|
| 07.02.13 |
FEniCS on a Moebius strip by Marie Rognes |
|
| 07.03.13 |
The FEniCS Project - Organization, Practices, Maintenance and Distribution by Anders Logg |
|
| 14.03.13 |
Status of effective translation of complicated forms in FEniCS by Martin Sandve Alnæs |
|
| 11.04.13 |
A Method for Fluid Structure Interaction by Jan Helmig Impact of CFD Solution Strategy on Predicted Aneurysm Hemodynamics: Good News and Bad News by Kristian Valen Sendstad |
|
| What |
|
|---|---|
| When |
May 14, 2009 12:00 AM
to Dec 31, 2016 01:30 PM |
| Where | Bakrommet @ Simula |
| Contact Name | Øyvind Evju |
| Attendees |
07.10.09: Marie E. Rognes Kristoffer Selim Kristian Valen-Sendstad Aron Wahlberg Anders Logg Tor Gillberg Stuart Clark Rainer Nerlich Andre Massing Harish Narayanan 14.10.09: Marie E. Rognes Kristoffer Selim Kristian Valen-Sendstad Aron Wahlberg Anders Logg Tor Gillberg Rainer Nerlich Andre Massing Harish Narayanan 28.10.09Martin Alnæs Marie E. Rognes Kristoffer Selim Aron Wahlberg Anders Logg Tor Gillberg Rainer Nerlich Andre Massing Harish Narayanan Stuart Clark Emil Løvgren 28.01.10 Marie E. Rognes Anders Logg Andre Massing Aron Wahlberg Kristoffer Selim Kristian Valen-Sendstad Johannes Ring Benjamin Kehlet 04.02.10 Marie E. Rognes Anders Logg Andre Massing Aron Wahlberg Kristoffer Selim Kristian Valen-Sendstad Johannes Ring Benjamin Kehlet 11.02.10 Molly Maleckar Hans Petter Langtangen Stuart R. Clark Rainer Nerlich Marie E. Rognes Anders Logg Andre Massing Aron Wahlberg Kristoffer Selim Johannes Ring Benjamin Kehlet 18.02.10 Marie E. Rognes Andre Massing Tor Gillberg Hans Petter Langtangen Wenjie Wei Benjamin Kehlet Aron WahlbergMartin Alnæs Anders Logg Asbjørn Heid Kristoffer Selim Omar Al-Khayat 25.02.10 Marie E. Rognes Anders Logg Andre Massing Aron Wahlberg Kristoffer Selim Mats Larson Omar Al-Khayat 05.03.10 Marie E. Rognes Anders Logg Andre Massing Aron Wahlberg Kristoffer Selim Johannes Ring Benjamin Kehlet Harish Narayanan 25.03.10 Marie E. Rognes Anders LoggMartin Alnæs Andre Massing Aron Wahlberg Kristoffer Selim Johannes Ring Benjamin Kehlet Harish Narayanan Asbjørn Heid Molly Maleckar Joakim Sundnes Glenn Terje Linnes 08.04.10 Marie E. Rognes Anders Logg Andre Massing Aron Wahlberg Kristoffer Selim Johannes Ring Benjamin Kehlet Molly Maleckar 22.04.10 Anders Logg Aron Wahlberg Andre Massing Marie Rognes Harish Narayanan Benjamin Kehlet Kristoffer Selim Johannes Ring Joachim Sundnes Samuel Wall Tor Gilberg Joachim Berdal Haga 03.06.10 Anders Logg Aron Wahlberg Andre Massing Marie Rognes Harish Narayanan Benjamin Kehlet Kristoffer Selim Kristian Valen-Sendstad Molly Maleckar Hans Petter Langtangen Johannes Ring Didem Unat 10.06.10 Aron Wahlberg Andre Massing Marie Rognes Harish Narayanan Benjamin Kehlet Kristoffer Selim Didem Unat Johannes Ring Tor Gillberg Karen-Helene Støverud 24.06.10 Anders Logg Aron Wahlberg Andre Massing Marie Rognes Benjamin Kehlet Kristoffer Selim Johannes Ring Tim Dorscheidt Xing Kai Stuart Clark Rainer Nerlich Didem Unat 16.09.2010 Anders Logg Aron Wahlberg Andre Massing Marie Rognes Benjamin Kehlet Kristoffer Selim Johannes Ring Tim Dorscheidt Anna Blechingberg Mats Larson Ida Norderhaug Drøsdal 25.11.10 Anders Logg Andre Massing Marie Rognes Benjamin Kehlet Kristoffer Selim Johannes Ring Tor Gillberg Karen-Helen Støverud Lyudmyla Vynnytska 12.01.11 Anders Logg Andre Massing Marie Rognes Benjamin Kehlet Kristoffer Selim Johannes Ring Stuart Clark Anna Blechingberg Joachim Berdal Haga 01.02.11 Anders Logg Hans-Petter Langtangen Andre Massing Marie Rognes Benjamin Kehlet Tor Gillberg Mohammed Sourari Johannes Ring Karen-Helene Støverud Joachim Berdal Haga 24.02.11 Anders Logg Kristoffer Selim Andre Massing Marie Rognes Benjamin Kehlet 12.04.11 Anders Logg Kristoffer Selim Andre Massing Marie Rognes Benjamin Kehlet Johannes Ring Kent-Andre Mardal Martin Alnæs Kristian Valen-Sendstad Øyvind Evju Eline Sundt 03.05.11 Anders Logg Harish Naranayan Andre Massing Karen Støverud Benjamin Kehlet Johannes Ring Øyvind Evju Kent-Andre Mardal Martin Alnæs Kristian Valen-Sendstad Lyudmyla Vynnytska Steffen Müthing 04.05.11 Anders Logg Harish Naranayan Andre Massing Karen Støverud Benjamin Kehlet Johannes Ring Kent-Andre Mardal Martin Alnæs Kristoffer Hans-Petter Langtangen Steffen Müthing 18.05.11 Andre Massing Karen Støverud Benjamin Kehlet Johannes Ring Martin Alnæs Kristoffer Selim Hans-Petter Langtangen Steffen Müthing Omar Al-Khayat Marie Rognes Kristian Valen-Sendstad 19.05.11 18.05.11 Andre Massing Karen Støverud Benjamin Kehlet Johannes Ring Steffen Müthing Marie Rognes Kristian Valen-Sendstad 22.09.2011 Anders Logg Marie Rognes Steffen Müthing Benjamin Kehlet Andre Massing Karen-Helene Støverud Hans-Petter Langtangen Kent-Andre Mardal Gabriel Balaban Johannes Ring 29.09.11 Anders Logg Marie Rognes Hans Petter Langtangen Xing Cai Wenjie Wei Kent-Andre Mardal Gabriel Balaban Johannes Ring Benjamin Kehlet Andre Massing Steffen Müthing 13.10.11 Marie Rognes Kent-Andre Mardal Gabriel Balaban Benjamin Kehlet Johannes Ring Mikkel B.S. 20.10.11 Fredrik Valdmanis Anders Johansen Anders Logg Marie Rognes Benjamin Kehlet Hans Petter Langtangen Martin Alnæs Gabriel Balaban Johannes Ring 24.11.11 Benjamin Kehlet Sebastian Warmbrunn Marie Rognes Anders Logg Kent-Andre Mardal Johannes Ring Martin Alnæs Mikal Mortensen Marie Rognes Joakim Sundnes 01.12.11 Martin Alnæs Anders Helgeland Benjamin Kehlet Johannes Ring Joakim Sundnes Glenn Lines Xing Cai Mikael Mortensen Sebastian Warmbrum Kent-Andre Mardal Gabriel Balaban Marie Rognes Anders Logg 12.01.12 Kent-Andre Mardal Hans Petter Langtangen Johannes Ring Benjamin Kehlet Martin Alnæs Sebastian Warmbrunn Fredrik Valdmanis Mikkel B. Sanderud Adrian Hope 20.01.12 Karen-Helene Støverud Kent-Andre Mardal Mikael Mortensen Martin Alnæs Sebastian Warmbrunn Johan Hake Benjamin Kehlet 02.02.12 Martin Alnæs Hans Petter Langtangen Joakim Sundnes Kent-Andre Mardal Marie Rognes Karen-Helene Støverud Benjamin Kehlet Johannes Ring Andre Massing Sebastian Warmbrunn Mikael Mortensen 15.02.12 Knut Erik Skare Anders Logg Marie Rognes Andre Massing Karen Støverud Sebastian Warmbrunn Benjamin Kehlet Kent-Andre Mardal 15.03.12 Xing Cai Anders Logg Kent-Andre Mardal Marie Rognes Andre Massing Joakim Sundnes Glenn Terje Lines Benjamin Kehlet Karen Støverud Johannes Ring Bernardo Lino de Oliveira 19.04.12 Johan Hake Sebastian Warnbrunn Gabriel Balaban Benjamin Kehlet Karen Støverud Anders Logg Marie Rognes Kent-Andre Mardal Martin Alnæs 07.11.12 Martin Alnæs Karen Helene Støverud Jan Helmig Anders Johansen Benjamin Kehlet Johannes Ring 14.11.12 Andre Massing Marie Rognes Jan Helmig Mikkel Øyvind Evju Benjamin Kehlet Johannes Ring Karen-Helene Støverud 21.11.12 Joakim Sundnes Anders Logg Marie Rognes Karen-Helene Støverud Øyvind Evju Benjamin Kehlet Johannes Ring 13.12.12 Hans Petter Langtangen Anders Logg Andre Massing Karen-Helene Støverud Jan Helmig Johannes Ring Benjamin Kehlet 19.12.12 Marie Rognes Martin Alnæs Jan Helmig Hans Petter Langtangen Johannes Ring Andre Massing Karen-Helene Støverud Kent-Andre Mardal Benjamin Kehlet 24.01.13 Marie Rognes Martin Alnæs Hans Petter Langtangen Johannes Ring Andre Massing Karen-Helene Støverud Kent-Andre Mardal Anders Logg Øyvind Evju Dag Sverre Seljebotn Patrick Farrell 07.02.13 Marie Rognes Martin Alnæs Andre Massing Karen-Helene Støverud Anders Logg Øyvind Evju Jan Helmig Johannes Ring Gabriel Balaban Johan Hake Mats Larson 07.03.13 Marie Rognes Martin Alnæs Andre Massing Karen-Helene Støverud Anders Logg Øyvind Evju Johannes Ring Gabriel Balaban Johan Hake Iben Simonsen Kent-Andre Mardal 14.03.13 Marie Rognes Martin Alnæs Andre Massing Karen-Helene Støverud Anders Logg Øyvind Evju Johannes Ring Gabriel Balaban Hans Petter Langtangen Jan Helmig Adrian Hope Johan Hake Iben Simonsen Joakim Sundnes 11.04.13 Marie Rognes Martin Alnæs Andre Massing Karen-Helene Støverud Anders Logg Øyvind Evju Johannes Ring Gabriel Balaban Hans Petter Langtangen Jan Helmig Adrian Hope Iben Simonsen Kent-Andre Mardal Kristian Valen-Sendstad Owais Khan Mikael Mortensen |
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